Clone FI01819 Report

Search the DGRC for FI01819

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:18
Well:19
Vector:pFlc-1
Associated Gene/TranscriptOgg1-RA
Protein status:FI01819.pep: gold
Sequenced Size:1321

Clone Sequence Records

FI01819.complete Sequence

1321 bp assembled on 2009-05-13

GenBank Submission: BT083427.1

> FI01819.complete
AAAACAAATGCTAAACAGCTGATAGCAATAACACATTTTATTCAGCGAGT
TTGTTTCTTTCGATTTAAACTCGAGTTTTAATGTGGTTTACTATTTAAAC
GTGACAAAGTACTATTGTTAAGTATGCCAAAACACGGCTTAAGTTGTTTA
TAAAACCGGATGCTGGCTCATAACCTAGGTTTCCATAAAAAGCGCCTTTT
TTCAAACATGAAGGCTGTTTTACAGGATCGGGGTGTCATAGGCTTATCCC
TCGAAGAATGCGATTTGGAAAGAACTTTGCTTGGAGGACAGAGTTTCCGA
TGGCGATCCATATGCGATGGTAATAGAACGAAATATGGCGGAGTGGTGTT
CAACACCTACTGGGTGCTCCAGCAAGAAGAATCCTTCATAACTTACGAGG
CATACGGAACCAGCAGTCCTTTGGCCACGAAGGACTATTCTTCCTTGATA
TCTGACTACCTACGTGTTGATTTCGACCTAAAGGTCAACCAAAAAGATTG
GTTAAGCAAAGATGATAACTTTGTGAAGTTCTTGAGTAAGCCTGTGCGCC
TCCTTTCTCAGGAGCCGTTCGAAAACATTTTTAGCTTCCTTTGCAGTCAG
AACAATAACATCAAGCGCATATCATCTATGATTGAATGGTTTTGCGCTAC
ATTTGGCACCAAGATTGGTCACTTCAATGGTGCCGATGCGTATACATTTC
CCACGATAAATAGATTCCACGACATCCCATGCGAGGATCTTAATGCCCAG
CTAAGGGCTGCCAAGTTCGGTTATCGGGCCAAGTTCATAGCACAAACGCT
GCAAGAGATCCAGAAAAAGGGGGGACAAAACTGGTTCATAAGCCTAAAGA
GCATGCCGTTCGAAAAAGCTCGCGAGGAGCTGACACTGCTACCCGGAATC
GGATACAAAGTGGCCGATTGCATCTGCCTTATGTCAATGGGTCACTTGGA
GTCAGTGCCCGTCGACATTCATATTTACAGAATTGCCCAAAATTACTACC
TGCCACATCTAACCGGCCAAAAGAACGTAACCAAGAAGATTTACGAAGAG
GTCTCGAAACATTTTCAAAAGCTACACGGAAAGTATGCCGGTTGGGCTCA
AGCTATTCTCTTTTCTGCCGATTTGAGTCAATTTCAAAATACTTCCACAG
TTGCTTGTAAGAAAAAATCCAATAAAAAACCTAAAAAGTGATCTTATCTA
TTGGATTAAAAAAAAAAATATTCCTACTTGTAATATTTGAATATTAAAAT
ATAATAGAAATGTATATACTAATGTATATATAAATATATATCTAAACAGA
GAAAGAAAAAAAAAAAAAAAA

FI01819.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:26:14
Subject Length Description Subject Range Query Range Score Percent Strand
Ogg1-RA 1333 Ogg1-RA 34..1333 2..1301 6500 100 Plus
Blast to d_melanogaster_OreR.fa performed 2014-11-27 08:55:28
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 8582821..8583308 617..1104 2440 100 Plus
chrX 22417052 chrX 8582442..8582760 299..617 1595 100 Plus
chrX 22417052 chrX 8582087..8582384 2..299 1490 100 Plus
chrX 22417052 chrX 8583368..8583568 1105..1305 1005 100 Plus
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:55:25
Subject Length Description Subject Range Query Range Score Percent Strand
Ogg1-RA 1032 CG1795-PA 1..1032 160..1191 5160 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:06:55 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:55:23
Subject Length Description Subject Range Query Range Score Percent Strand
Ogg1-RA 1307 CG1795-RA 4..1307 2..1305 6520 100 Plus
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 08:55:27
Subject Length Description Subject Range Query Range Score Percent Strand
Ogg1-PA 343 CG1795-PA 1..333 160..1158 1769 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:55:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8691064..8691551 617..1104 2440 100 Plus
X 23542271 X 8690685..8691003 299..617 1595 100 Plus
X 23542271 X 8690330..8690627 2..299 1490 100 Plus
X 23542271 X 8691611..8691813 1105..1307 1015 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:20:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 8699162..8699649 617..1104 2440 100 Plus
X 23527363 X 8698783..8699101 299..617 1595 100 Plus
X 23527363 X 8698428..8698725 2..299 1490 100 Plus
X 23527363 X 8699709..8699911 1105..1307 1015 100 Plus
Blast to na_te.dros performed on 2014-11-27 08:55:22 has no hits.

FI01819.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2014-11-27 10:34:32 Download gff for FI01819.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 8583368..8583489 1105..1226 100 <- Plus
chrX 8582822..8583308 618..1104 100 -> Plus
chrX 8582443..8582760 300..617 100 -> Plus
chrX 8582086..8582384 1..299 99 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:53:32 Download gff for FI01819.complete
Subject Subject Range Query Range Percent Splice Strand
Ogg1-RA 1..1032 160..1191 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:51:57 Download gff for FI01819.complete
Subject Subject Range Query Range Percent Splice Strand
Ogg1-RA 1..1032 160..1191 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 12:57:04 Download gff for FI01819.complete
Subject Subject Range Query Range Percent Splice Strand
Ogg1-RA 1..1032 160..1191 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:34:32 Download gff for FI01819.complete
Subject Subject Range Query Range Percent Splice Strand
Ogg1-RA 1..1032 160..1191 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 15:06:48 Download gff for FI01819.complete
Subject Subject Range Query Range Percent Splice Strand
Ogg1-RA 2..1298 2..1298 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:51:57 Download gff for FI01819.complete
Subject Subject Range Query Range Percent Splice Strand
Ogg1-RA 1..1304 2..1305 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:57:04 Download gff for FI01819.complete
Subject Subject Range Query Range Percent Splice Strand
Ogg1-RA 3..1307 1..1305 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:34:32 Download gff for FI01819.complete
Subject Subject Range Query Range Percent Splice Strand
Ogg1-RA 3..1307 1..1305 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 10:34:32 Download gff for FI01819.complete
Subject Subject Range Query Range Percent Splice Strand
X 8691611..8691811 1105..1305 100   Plus
X 8691065..8691551 618..1104 100 -> Plus
X 8690686..8691003 300..617 100 -> Plus
X 8690329..8690627 1..299 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:57:04 Download gff for FI01819.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8585644..8585844 1105..1305 100   Plus
arm_X 8585098..8585584 618..1104 100 -> Plus
arm_X 8584719..8585036 300..617 100 -> Plus
arm_X 8584362..8584660 1..299 99 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:42:43 Download gff for FI01819.complete
Subject Subject Range Query Range Percent Splice Strand
X 8699709..8699909 1105..1305 100   Plus
X 8699163..8699649 618..1104 100 -> Plus
X 8698784..8699101 300..617 100 -> Plus
X 8698427..8698725 1..299 99 -> Plus

FI01819.pep Sequence

Translation from 159 to 1190

> FI01819.pep
MLAHNLGFHKKRLFSNMKAVLQDRGVIGLSLEECDLERTLLGGQSFRWRS
ICDGNRTKYGGVVFNTYWVLQQEESFITYEAYGTSSPLATKDYSSLISDY
LRVDFDLKVNQKDWLSKDDNFVKFLSKPVRLLSQEPFENIFSFLCSQNNN
IKRISSMIEWFCATFGTKIGHFNGADAYTFPTINRFHDIPCEDLNAQLRA
AKFGYRAKFIAQTLQEIQKKGGQNWFISLKSMPFEKAREELTLLPGIGYK
VADCICLMSMGHLESVPVDIHIYRIAQNYYLPHLTGQKNVTKKIYEEVSK
HFQKLHGKYAGWAQAILFSADLSQFQNTSTVACKKKSNKKPKK*

FI01819.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2014-11-28 06:42:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18268-PA 327 GG18268-PA 1..317 17..333 1578 90.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2014-11-28 06:42:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17644-PA 328 GH17644-PA 1..327 17..343 1112 60.4 Plus
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 06:42:32
Subject Length Description Subject Range Query Range Score Percent Strand
Ogg1-PA 343 CG1795-PA 1..343 1..343 1821 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2014-11-28 06:42:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16083-PA 324 GI16083-PA 1..324 17..339 1075 58.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2014-11-28 06:42:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21766-PA 327 GM21766-PA 1..316 17..332 1656 96.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2014-11-28 06:42:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16912-PA 327 GD16912-PA 1..317 17..333 1667 96.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2014-11-28 06:42:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15730-PA 323 GJ15730-PA 1..323 17..340 1099 59.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2014-11-28 06:42:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10343-PA 325 GK10343-PA 1..310 20..329 1083 60.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2014-11-28 06:42:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15798-PA 331 GE15798-PA 1..317 17..333 1571 90.2 Plus

FI01819.hyp Sequence

Translation from 159 to 1190

> FI01819.hyp
MLAHNLGFHKKRLFSNMKAVLQDRGVIGLSLEECDLERTLLGGQSFRWRS
ICDGNRTKYGGVVFNTYWVLQQEESFITYEAYGTSSPLATKDYSSLISDY
LRVDFDLKVNQKDWLSKDDNFVKFLSKPVRLLSQEPFENIFSFLCSQNNN
IKRISSMIEWFCATFGTKIGHFNGADAYTFPTINRFHDIPCEDLNAQLRA
AKFGYRAKFIAQTLQEIQKKGGQNWFISLKSMPFEKAREELTLLPGIGYK
VADCICLMSMGHLESVPVDIHIYRIAQNYYLPHLTGQKNVTKKIYEEVSK
HFQKLHGKYAGWAQAILFSADLSQFQNTSTVACKKKSNKKPKK*

FI01819.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:15:05
Subject Length Description Subject Range Query Range Score Percent Strand
Ogg1-PA 343 CG1795-PA 1..343 1..343 1821 100 Plus